GitHub Repository for: Prevalence of antimicrobial resistance phenotypes and genes in stable fly- and manure-derived bacterial isolates from clinically relevant taxa in dairy settings

<p dir="ltr">This repository contains data associated with the manuscript titled: "Prevalence of antimicrobial resistance phenotypes and genes in stable fly- and manure-derived bacterial isolates from clinically relevant taxa in dairy settings"</p><p dir="ltr">The following files are attached:</p><p dir="ltr">SupplementalFile1_AMR_Sommer.xlsx => Supplemental tables containing the disk diffusion results<br>· Table S1: PCR Primers and annealing temperatures used in this study<br>· Table S2: Antimicrobial resistance profiles and provenience of E. coli isolates<br>· Table S3: Antimicrobial resistance profiles and provenience of Klebsiella isolates<br>· Table S4: Antimicrobial resistance profiles and provenience of other Enterobacterales<br>· Table S5: Antimicrobial resistance profiles and provenience of Staphylococcaceae isolates<br>· Table S6: Antimicrobial resistance profiles and provenience of Enterococcus isolates<br>· Table S7: Antimicrobial resistance profiles and provenience of Acinetobacter isolates<br></p><p dir="ltr">ARS_R_AJS.R => Script used for the generation of Figure 1<br>ARS_Data_Summary.csv => Summarized table used as input for ARS_R_AJS.R</p>