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Amplicon sequencing data for: Heritable genetic differences affect sunflower rhizosphere archaeal, bacterial, and fungal communities across all taxonomic levels

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posted on 2024-12-30, 17:34 authored by Clifton Bueno de MesquitaClifton Bueno de Mesquita, Kyle G. Keepers, Nolan C. Kane, Brent S. Hulke

Amplicon sequencing data (16S and ITS) was deposited to NCBI Genbank under BioProject ID PRJNA1200133 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1200133).

Funding

USDA-ARS: 5442-21220-024

USDA-ARS: 3060-21220-034

USDA-ARS: 3060-21000-039

USDA-ARS: 3060-21000-043

USDA-ARS: 3060-21000-047

USDA-ARS National Sclerotinia Initiative

History

Data contact name

Smart, Brian, C.

Data contact email

brian.smart@ndsu.edu

Publisher

National Center for Biotechnology Information

Intended use

This paper provides insights into the heritability of rhizosphere microbial communities in sunflower inbred lines, useful for researchers in plant genetics, microbiology, and crop breeding. It can guide studies on plant-microbe interactions and help improve crop sustainability.

Use limitations

This paper has no usage restrictions and can be freely cited and applied in relevant research. It provides valuable insights for studies on plant-microbe interactions, microbial diversity, and heritability, and can be used as a resource for further investigations in agriculture and crop breeding.

Temporal Extent Start Date

2017-05-31

Theme

  • Non-geospatial

Geographic Coverage

{ "type": "FeatureCollection", "features": [ { "geometry": { "type": "Point", "coordinates": [ -99.120412, 47.508599 ] }, "type": "Feature", "properties": {} } ] }

Geographic location - description

47.508599, -99.120412; Carrington, North Dakota

ISO Topic Category

  • farming
  • biota

National Agricultural Library Thesaurus terms

genetic variation; Helianthus annuus; rhizosphere; Archaea; fungal communities; soil biology; heritability; genotype; species diversity; microbiome; North Dakota; computer software; sequence analysis

OMB Bureau Code

  • 005:18 - Agricultural Research Service

OMB Program Code

  • 005:040 - National Research

ARS National Program Number

  • 301

Pending citation

  • Yes

Related material without URL

Bueno de Mesquita, C. P., Keepers, K. G., Kane, N. C., & Hulke, B. S. (in review). Heritable genetic differences affect sunflower rhizosphere archaeal, bacterial, and fungal communities across all taxonomic levels. Plant and Soil.

Public Access Level

  • Public

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    Categories

    Keywords

    heritabilityrhizospheresunflowergenotypediversityassembly

    Licence

    CC0

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