Imperfect SSR Finder
model
posted on 2023-11-30, 08:20 authored by Daniel L. Stieneke, Imad EujaylThe Imperfect SSR Finder is an online tool to help geneticists find Simple Sequence Repeats (SSR), aka microsatellites or Short Tandem Repeats (STR), in uploaded FASTA sequences.
The Imperfect SSR Finder is an interactive website to help you find imperfect (and perfect) SSRs. You can test small snippets or upload large files, change the lengths and types of the SSRs your are looking for, and create output with SSRs in inverted case and/or color highlights. A tabular information file is also created in .CSV format, for easy import into any spreadsheet program.
Resources in this dataset:
Resource Title: Imperfect SSR Finder.
File Name: Web Page, url: https://ssr.nwisrl.ars.usda.gov/
Funding
Agricultural Research Service
History
Data contact name
Eujayl, ImadData contact email
Imad.Eujayl@ARS.USDA.GOVPublisher
United States Department of AgricultureTheme
- Not specified
ISO Topic Category
- environment
National Agricultural Library Thesaurus terms
computer software; microsatellite repeats; nucleotides; Biological SciencesOMB Bureau Code
- 005:18 - Agricultural Research Service
OMB Program Code
- 005:040 - National Research
Pending citation
- No
Public Access Level
- Public
