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ba1-GN135

dataset
posted on 2024-06-11, 07:16 authored by USDA
Bulked-segregant analysis and next-generation sequencing was utilized to map and identify the mutation in the maize stock ba*-GN135. The material is from EMS mutagenesis of B73. The identify barren stalk was identified in the M2 generation and was backcrossed to A619 four times. Therefore, this material is a BC4M2 pool of mutants that were sequenced. A mapped base cloning approach was used by calling SNPs and plotting the allele frequency across all ten maize chromosomes.This allele is now designated as ba1-GN135.

Funding

National Institute of Food and Agriculture, 2019-67012-29655

National Science Foundation, IOS-1546873

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-06-13

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA848842

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA848842 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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    Categories

    Keywords

    raw sequence reads

    Licence

    Copyright Undetermined

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