Ag Data Commons
Browse

File(s) stored somewhere else

Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.

'HoneySweet' Plum leaf small RNAs

dataset
posted on 2024-02-06, 23:58 authored by USDA-Agricultural Research Service
The question was if there are specific small RNAs that are responsible for the high resistance to Plum Pox Virus, of the transgenic plum, 'HoneySweet', which has the coat protein gene for PPV. 'HoneySweet' plum trees in the field were exposed to Plum Pox Virus Rec strain through a graft of infected 'Emma Leppermann'. After five years the graft was removed from four of the trees. Small RNAs were sequenced from unexposed 'HoneySweet' trees, 'HoneySweet' trees that contained the graft as well as those that the infected graft had been removed. The goal was to determine the population of small RNAs related to Plum Pox Virus in 'HoneySweet' reative to the infected 'Emma Leppermann'. Samples were taken from leaf tissue above and below the graft as well as the graft, to determine if movement of the small RNAs took place.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-06-28

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA741990

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC