Ag Data Commons
Browse

File(s) stored somewhere else

Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.

Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 genome sequencing and assembly

dataset
posted on 2024-06-11, 06:12 authored by USDA
Xylella fastidiosa (Xf), a gram-negative bacterial pathogen that causes disease on numerous economically relevant hosts (e.g., grape, almond, olive, citrus, coffee, and blueberry), is divided into several subspecies. Pierce’s disease (PD) of grape (Vitis vinifera) is caused by Xf subsp. fastidiosa strains, whereas bacterial leaf scorch (BLS) of blueberry (Vaccinium sp.) is caused by Xf subsp. multiplex strains; however, some subsp. fastidiosa originating from Georgia are capable of inducing BLS symptoms on blueberry cv. Rebel after artificial inoculation and maintenance under greenhouse conditions. The genome of Xf subsp. fastidiosa strain Bakersfield-1 was sequenced as part of a project to assess the capability of California PD-causing strains to cause disease on blueberry.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-11-14

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA545724

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA545724 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC