Whole-genome resequencing of Castanea species

Name: Whole-genome resequencing of Castanea species
Published: 2024-11-23T22:16:42+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-11-23, 22:16 authored by Virginia Tech

This project performed whole-genome resequencing on wild American chestnut (Castanea dentata), Chinese chestnut (Castanea mollissima), Japanese chestnut (Castanea crenata), European chestnut (Castanea sativa), Allegheny chinquapin (Castanea pumila), Ozark chinquapin (Castanea ozarkensis), Alabama chinquapin (Castanea alabamensis), Chinese chinquapin (Castanea henryi), and Seguin chestnut (Castanea seguinii). The goal of this project is to explore the patterns of genomic diversity within wild American chestnut populations and evaluate the phylogenetic relationships between Castanea species.

Funding

USDA-NIFA: 1018599

USDA-NIFA: 1005394

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-02-07

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA804196

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA804196 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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