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Vitis rotundifolia cultivar:Noble Genome sequencing

dataset
posted on 2024-01-27, 05:11 authored by Florida Agricultural & Mechanical University
To establish the basis for the study of Muscadinia species, we generated chromosome-level whole-genome sequences of V. rotundifolia. A total of 393.8 Mb of 20 haploid chromosome sequences was assembled, and a total of 26,394 coding genes were identified from the sequences. The comparative analysis with the genome sequence of V. vinifera revealed smaller size of V. rotundifolia genome due to the differential activity of LTR-retrotransposons.

Funding

National Institute of Food and Agriculture, 1018161

National Institute of Food and Agriculture, 1019285

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-03-12

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA738474

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