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Vibro tubiashii ATCC 19109 Genome sequencing

dataset
posted on 2024-06-11, 07:10 authored by USDA-Agricultural Research Service-Eastern Regional Research Center
Vibrio tubiashii is the cause of bacillary necrosis in larval shellfish. It is a naturally occurring, Gram-negative, marine bacterium that has long been associated with high mortalities of larval shellfish and significant economic losses in shellfish hatcheries. High mortalities in larval oyster and clam production facilities have been associated with contamination by V. tubiashii and have led to reductions in the availability of seed oysters and clams needed for commercial shellfish planting. Although V. tubiashii has been known for years, the lack of complete genome sequence has slowed the pace of research on this pathogen. Some strains reported to be V. tubiashii, including the American Type Culture Collection [ATCC, Manassas, VA] strain 19105, and strain RE22 were previously misidentified as V. tubiashii and were actually V. coralliilyticus, which is also a shellfish pathogen. In this study, we fully sequenced and annotated the ATCC type strain of V. tubiashii (ATCC 19109) to allow better differentiation between the species and to facilitate research on potential virulence genes and pathogen control mechanisms.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2014-11-04

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA256164

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA256164 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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