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Trichinella nelsoni strain:ISS37 Genome sequencing and assembly

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posted on 2024-09-29, 06:54 authored by Contact; Asis Khan, USDA-ARS Animal Parasitic Diseases Lab

Parasitic roundworms (nematodes) of the genus Trichinella are the causative agent of trichinellosis in humans. The genus of Trichinella is characterized by at least 13 species and genotypes. Here, we present the first long-read assembly of T. nelsoni, which consists of 633 contigs comprising a 61.62 Mb genome with 96% completeness assessment and encompassing 13,307 protein-coding genes. We believe this current genome assembly of T. nelson will help researchers to exploited as a reference genome to identify markers for detection and outbreak investigation.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-10-14

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

Public Access Level

Public

Accession Number

PRJNA885854

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA885854 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Trichinella nelsoni ISS37 eEukaryotes genome sequencing

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