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TreeGenes

dataset
posted on 2024-02-09, 18:01 authored by Jill L. Wegrzyn, Jennifer M. Lee, Brandon R. Tearse, David B. Neale

The TreeGenes database provides custom informatics tools to manage the flood of information resulting from high-throughput genomics projects in forest trees from sample collection to downstream analysis. This resource is enhanced with systems that are well connected with federated databases, automated data flows, machine learning analysis, standardized annotations and quality control processes. The database itself contains several curated modules that support the storage of data and provide the foundation for web-based searches and visualization tools.


Resources in this dataset:

Funding

USDA: 2016-67013-24469

National Science Foundation: 1443040

National Science Foundation: 1444573

History

Data contact name

TreeGenes

Data contact email

treegenesdb@gmail.com

Publisher

TreeGenes: A Forest Tree Genome Database. International Journal of Plant Genomics

Theme

  • Not specified

ISO Topic Category

  • biota

Ag Data Commons Group

  • AgBioData

National Agricultural Library Thesaurus terms

databases; genomics; forest trees; artificial intelligence; quality control

OMB Bureau Code

  • 005:00 - Department of Agriculture

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Wegrzyn, J., Lee, J., Tearse, B., & Neale, D. (2008). TreeGenes: A Forest Tree Genome Database. International Journal Of Plant Genomics, 2008, 1-7. http://dx.doi.org/10.1155/2008/412875

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