Transposon sequencing of Xylella fastidiosa M23 in grapevine and almond

dataset

posted on 2024-09-29, 07:06 authored by USDA-ARS

This study used transposon sequencing (Tnseq) to predict genes essential for Xylella fastidiosa growth in plants. Tn5 transposon mutant pools of Xylella fastidiosa M23 were inoculated into susceptible grapevines and almond plants, and re-isolated after ten weeks. These sequences are 3 replicates each of Tn5 mutant pools re-isolated from grapevine, almond, and from growth in rich culture medium (PD3).

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-05-13

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA1111135

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1111135 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

Keywords

raw sequence reads eRawSequenceReads

Licence

Exports

RefWorks

BibTeX

Ref. manager

Endnote

DataCite

NLM