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Transcriptomic response of sweet basil leaves (Ocimum basilicum) following downy mildew (Peronospora belbahrii) inoculation at two timepoints

dataset
posted on 2024-06-11, 06:24 authored by USDA
Basil downy mildew infects this specialty crop throughout the world, causing diminished yields. To better understand the plant genetic response to downy mildew infection in a susceptible basil cultivar, whole transcriptomes were collected from detached leaves at 3 and 6 days after inoculation with an Illinois isolate of Peronospora belbahrii. Whole transcriptomes from detached leaves inoculated with water served as control samples. This study should also enable identification of critical genes expressed by the pathogen at the these timepoints.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-07-17

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA647030

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA647030 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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