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Transcriptomic response of farmed Atlantic surfclams (Spisula solidissima) to heat stress

dataset
posted on 2024-06-11, 06:17 authored by Rutgers University
We examined the Atlantic surfclam (Spisula solidissima) transcriptome under heat stress and assessed how a selective pressure could alter the gene expression profile of a surfclam population. We utilized two groups of clams, one which had been selected for greater heat tolerance via an acute heat stress four months prior to the study, and a group of randomly-selected control clams that never experienced severe heat stress. After a six-hour exposure to 16 or 29C, we compared the transcriptome expression profiles of the four temperature/group combinations.

Funding

National Institute of Food and Agriculture, #GNE17-141-31064

National Oceanic and Atmospheric Administration, #NA14OAR4170085

National Oceanic and Atmospheric Administration, #NA18-OAR4170357

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2019-12-19

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA596792

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA596792 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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