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Transcriptome profile of pecan scab resistant and susceptible trees from a pecan provenance collection

dataset
posted on 2024-01-27, 00:43 authored by United States Department of Agriculture
Transcriptomes for pecan trees (Carya illinoinensis) that were consistently resistant and susceptible to wild populations of Venturia effusa across three years of data collection where quantified using RNAseq. Venturia effusa is the causative agent of the most yield limiting disease for pecan in humid regions. The transcriptomes of infected susceptible plants were also quantified. Evaluation of data generated for this work will help identify genes and biological pathways responsible for susceptibility/resistance to the pathogen. This information will help lead future breeding programs and give biotechnological options for durable resistance to pecan scab.

Funding

U.S. Department of Agriculture, 6042-21220-014-000-D

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2023-07-06

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA992068

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