Transcriptome analysis of Macrophomina phaseolina in strawberry

https://hdl.handle.net/10113/AF30194335
Open external identifier URL

dataset

posted on 2025-09-24, 03:45 authored by University of California, Davis

We performed dual RNAseq analysis to profile the molecular interactions between strawberry and Macrophomina phaseolina, a plurivorous soilborne fungus, and to identify virulence factors and pathogenicity-related genes in the pathogen as well as well as susceptibility factors in strawberry. Our data will provide a blueprint for of the trascriptome of this pathosystem that is essential in pathogen surveillance and resistance breeding.

Funding

USDA-NIFA: 2022-51181-38328

CDFA: 59-2038-1-001-0

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2025-08-18

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1307604 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."