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Transcriptional response of sweet sorghum lines varying in resistance to stalk rot pathogens

dataset
posted on 2024-06-11, 06:31 authored by USDA-ARS
Sweet sorghum is grown for forage, fuel, and sweetener. Stalk rots caused by Fusarium thapsinum (Fusarium stalk rot) and Macrophomina phaseolina (charcoal rot) can significantly impact yields and quality. This study compared responses to wound inoculation with each fungus, and the control, of two lines, at two timepoints. The two lines differed in responses to stalk rots: Colman is susceptible while M81-E, a line with potential for use in bioenergy, is moderately resistant.

Funding

U.S. Department of Agriculture, 2016-67009-2542

U.S. Department of Agriculture, 3042-21220-033-00

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-09-29

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA666492

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA666492 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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    Keywords

    raw sequence reads

    Licence

    Copyright Undetermined

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