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Transcriptional reprogramming in wheat by the necrotrophic effector SnTox5 secreted by Parastagonospora nodorum

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posted on 2025-12-22, 04:16 authored by United States Department of Agriculture
SnTox5 is a necrotrophic effector that is released by the necrotrophic wheat fungal pathogen Parastagonospora nodorum. In the presence of the wheat susceptibility gene Snn5, SnTox5 induces programmed cell death to the pathogen's advantage. Here, we present an RNAseq data set that was developed for the inoculation of Snn5 wheat differential line LP29 with Sn2000 (with SnTox5), SnTox5 mutant of Sn2000 (without SnTox5), Sn791087 (without SnTox5), and SnTox5 transformant Sn791087 to investigate the transcriptional reprogramming in wheat and P. nodorum that occurs upon the secretion of SnTox5 through differentially expressed gene analysis. Additionally, transcripts derived from the RNAseq data set were used to reannotate the Sn2000 and Sn791087 genomes of P. nodorum and to evaluate genomewide effector expression and roles during P. nodorum infection.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2025-11-23

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1367956 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Accession Number

PRJNA1367956

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