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The effect of seed tuber tare soil on the potato rhizosphere microbiome

dataset
posted on 2024-01-27, 00:13 authored by Oregon State University HAREC
Understanding the factors influencing microbiome composition in the rhizosphere is an important step towards managing the microbiomes of globally important crops like potato. We tested whether potato tare soil (i.e. soil adhering to the tuber surface) on seed tubers influences microbial community composition of the developing rhizosphere using a surface sterilization treatment to remove tare soil from seed tubers compared to a control group. We used ITS and 16S metabarcoding to characterize the fungal and bacterial rhizosphere communities of 300 potato plants grown from the experimental seed tubers.

Funding

U.S. Department of Agriculture, 1023942

U.S. Department of Agriculture, 2018-51181-28704

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-03-26

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA717671

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