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Spinach whole genome resequencing

dataset
posted on 2024-09-29, 06:51 authored by University of Arkansas
The purpose of this project is to build a molecular breeding platform integrated into a classical breeding approach in spinach. With improved next generation sequencing (NGS) and the decreasing cost of sequencing, it is becoming feasible to discover millions of single-nucleotide-polymorphisms (SNPs) for any plant and connect these markers to desirable phenotypic traits. Spinach is a very popular vegetable crop, which can greatly benefit from the development of molecular tools to improve commercial cultivars. In this project, we will discover million SNPs using whole genome resequencing technology in spinach.

Funding

USDA-AMS SCMP: 16SCCMAR0001

USDA SCRI: 2017-51181-26830

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-07-21

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA860974

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA860974 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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