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Soybean Compact Mutant

dataset
posted on 2024-01-27, 00:43 authored by USDA-ARS
Genome resequencing for mutation discovery in soybean short internode mutant. Whole-genome sequencing of the mutant revealed an 8.7kb deletion in the promoter of the Glyma.17g145200 gene, which encodes a member of the class III gibberellin 2-oxidases. The mutation has a dominant effect, likely via increased expression of the GA 2-oxidase transcript observed in green tissue as a result of the deletion in the promoter of Glyma.17g145200. Levels of GA precursors are altered in the Compact mutant, supporting a role in gibberellin metabolism, and the mutant phenotype can be rescued with exogenous GA3.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2023-07-20

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA996935

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