Sorghum bicolor raw sequence reads

https://hdl.handle.net/10113/AF29964833
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dataset

posted on 2025-08-22, 03:36 authored by University of Nebraska-Lincoln

Raw PacBio WGS and RNA IsoSeq reads from CRISPR-edited RTx430 Sorghum bicolor. This study was conducted to investigate differences in seed nutrition resulting from a CRISPR-induced ~400kb genomic deletion within the k1C alpha kafirin family. Samples 0001 and 0002 contain the waxya mutation resulting in a loss of function in granule bound starch synthase I. Samples 0005 and 0006 are wild-type RTx430. Samples 0001, 0002, 0003, and 0004 contain the ~400kb k1C deletion.

Funding

USDA: 2021-67013-33831

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2025-07-03

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1285952 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."