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Solenopsis invicta sequencing

dataset
posted on 2025-01-22, 05:16 authored by USDA ARS CMAVE
Significant genotypic variation was discovered in the Solenopsis invicta venom 2 gene in a small number of Solenopsis invicta field colonies that exhibited strong identity to the Solenopsis richteri venom 2 ortholog from the congener, Solenopsis richteri. Phylogenetic analysis of the Solenopsis invicta venom 2 protein sequences revealed a significant evolutionary relationship with Solenopsis richteri despite being confirmed as Solenopsis invicta. A unique, truncated, Solenopsis invicta venom 2-like protein was also discovered in these colonies originating from a unique locus on chromosome 10 where multiple duplication events have apparently copied this gene. Western blotting with monoclonal antibodies specific for different, unique regions confirmed translation of the truncated Solenopsis invicta venom 2-like transcript. Apparent differences in expression patterns were noted when the truncated form of the venom was expressed.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-10-29

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA1179381

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1179381 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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