Ag Data Commons
Browse

File(s) stored somewhere else

Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.

Simultaneous Transcriptome Profiles of Human Pathogenic Bacteria and Leaves of Arabidopsis and Lettuce

dataset
posted on 2024-01-26, 23:55 authored by University of California, Davis
We aimed to simultaneously obtain the transcriptomic profiles of the two human pathogenic bacteria most frequently linked to produce outbreaks, Salmonella and E. coli, with the model plant Arabidopsis and the vegetable crop lettuce. The dual RNA-seq analysis conducted here enabled us to exhibit the shared and separate biological processes of bacterial- and plant-species modulated during this interaction. In addition, we identified multiple bacterial and plant genes with potential key roles in the leaf colonization by these two human pathogenic bacteria.

Funding

National Institute of Food and Agriculture, 2015-67017-23360

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-05-20

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA634120

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC