Shotgun Whole Genome Sequencing of Chicken tracheal swab sample

dataset

posted on 2024-09-29, 06:10 authored by USDA

This study demonstrates the potential of whole-genome sequencing for rapid detection and characterisation of etiologic agents found in clinical samples. We were able to detect and characterize Ornithobacterium rhinotracheale in tracheal swab collected from chicken. Furtheremore, a novel N4-like Prophage was recovered from sequencing set.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-03-01

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA557334

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA557334 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Ornithobacterium rhinotracheale eBacteria genome sequencing Genome sequencing and assembly eSequence

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Exports

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