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Shot-gun metagenomic sequencing of onion foliage

Name: Shot-gun metagenomic sequencing of onion foliage
Published: 2024-06-11T06:59:35+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 06:59 authored by University of Georgia

We conducted a metagenomics survey on the onion foliage for OxiDate pre-treated BlightBan (a.i, Pseudomonas fluorescens A506) plots, only BlighBan treated plots, and non-treated control plots to monitor the population dynamics of P. fluorescens A506 on onion leaves. This study was conducted to better understand the effect of microbicide (OxiDate) application on the efficacy of biocontrol agents to manage the center rot disease on onion foliage and bulbs.

Funding

National Institute of Food and Agriculture, 2019-03518

Specialty Crop Block Grant, NA

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-11-22

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA904248

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA904248 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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