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Sequencing and Assembly for Two Bacteria Isolated from Wheat Straw: Thermoclostridium stercorarium subsp. RKWS-1 and Thermoanaerobacter sp. RKWS-2

Name: Sequencing and Assembly for Two Bacteria Isolated from Wheat Straw: Thermoclostridium stercorarium subsp. RKWS-1 and Thermoanaerobacter sp. RKWS-2
Published: 2024-06-11T06:57:44+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: genome sequencing and assembly

dataset

posted on 2024-06-11, 06:57 authored by North Carolina State University

Plant biomass residues were found to harbor dormant anaerobic, thermophilic bacteria. The goal of this study was to understand what types of thermophilic life might persist in mesophilic biomass samples and to investigate novel carbohydrate-active enzymes from these organisms. In this project, two bacteria were isolated from wheat straw after incubation in "Low-Carbon" LC medium and "Media for Thermophilic Clostridia" MTC medium at 60C. Specifically, a (hemi)cellulolytic, anaerobic, bacterium, Thermoclostridium stercorarium RKWS1, and a non-cellulolytic anaerobic bacterium, Thermoanaerobacter sp. RKWS2, were isolated and their genomes sequenced.

Funding

U.S. Department of Agriculture, NIFA 2018-67021-27716

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2022-10-03

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA886731

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA886731 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

genome sequencing and assembly

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