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Sequencing Data from: Environment, plant genetics, and their interaction shape important aspects of sunflower rhizosphere microbial communities [NCBI BioProject]

dataset

posted on 2024-09-27, 14:47 authored by Clifton Bueno de MesquitaClifton Bueno de Mesquita, Corinne WalshCorinne Walsh, Ziv Attia, Brady Koehler, Zachary Tarble, David Van Tassel, Nolan C. Kane, Brent S. Hulke

NCBI BioProject

Description: Houses the amplicon sequencing data (16S and ITS) used in the study.
BioProject ID: PRJNA1114128
Link: https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA1114128

Funding

USDA-ARS: 5442-21220-024

USDA-ARS: 3060-21220-034

USDA-ARS: 3060-21000-039

USDA-ARS: 3060-21000-043

USDA-ARS: 3060-21000-047

SCLEROTINIA INITIATIVE

Agricultural Research Service

Find out more...

History

Data contact name

Smart, Brian, C.

Data contact email

brian.smart@ndsu.edu

Publisher

NCBI

Intended use

This data is intended for researchers studying plant-microbe interactions, rhizosphere ecology, and the effects of genotype and environment on microbial communities. It can be used for comparative analyses, meta-analyses, or as a reference for similar studies on other plant species or environments.

Use limitations

While the data is provided under CC0, users should cite the original paper when using this data in their research.

Temporal Extent Start Date

2020-05-15

Temporal Extent End Date

2020-08-31

Theme

Geospatial

Geographic Coverage

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Geographic location - description

Velva, ND Mandan, ND Mentor, MN Grandin, ND Carrington, ND Casselton, ND Brookings, SD The Land Institute, KS Lindsborg, KS Ralls, TX Kirkmeyer (Brighton, CO) Burlington, CO McLaughlin, SD Pierre, SD -100.9931027,48.1540877 -100.9335313,46.776022 -96.157576,47.6910183 -97.0468172,47.2365859 -99.1250821,47.518617 -97.2274694,46.8835384 -96.7890523,44.3686259 -97.5675113,38.7683104 -97.7607953,38.5372324 -101.3970328,33.6812646 -104.6952639,40.0023844 -102.271667,39.186944 -100.913158,45.772105 -100.107642,44.53828

ISO Topic Category

environment
farming
geoscientificInformation
location
biota

National Agricultural Library Thesaurus terms

plant genetics; Helianthus annuus; rhizosphere; microbial communities; microbiome; Sclerotinia; Great Plains region; fungi; climate

OMB Bureau Code

005:18 - Agricultural Research Service

OMB Program Code

005:040 - National Research

ARS National Program Number

Pending citation

Related material without URL

Bueno de Mesquita, C. P., Walsh, C. M., Attia, Z., Koehler, B. D., Tarble, Z. J., Van Tassel, D. L., Kane, N. C., & Hulke, B. S. (in press). Environment, plant genetics, and their interaction shape important aspects of sunflower rhizosphere microbial communities. Applied and Environmental Microbiology.

Public Access Level

Public