Ag Data Commons
Browse

File(s) stored somewhere else

Please note: Linked content is NOT stored on Ag Data Commons and we can't guarantee its availability, quality, security or accept any liability.

Selective genotyping of Beta vulgaris ssp. vulgaris for geosmin association mapping

dataset
posted on 2024-01-27, 00:19 authored by University of British Columbia, University of Wisconsin-Madison Biotechnology Center
Geosmin, a degraded sesquiterpene molecule with earthy and musty odor, imbues table beet with its characteristic aroma. Geosmin is heritable and endogenously produced in table beet. This work employed association analysis and selective genotyping of a segregating F2:3 mapping population to seek QTL associated with geosmin concentration in table beet. GBS reads were aligned to sugar beet reference genome EL10.2, and association analysis revealed two QTL for geosmin concentration on B. vulgaris ssp. vulgaris Chromosome 8. This study, the first molecular genetic mapping experiment in table beet, provides the basis for fine mapping or candidate gene investigation of functional loci for this distinctive sensory trait.

Funding

U.S. Department of Agriculture, WIS02032

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-09-19

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA764531

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC