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Rice rhizosphere metagenome Raw sequence reads

dataset
posted on 2024-01-27, 00:04 authored by USDA ARS
Rice rhizophere soil metagenome samples from two parent lines (Francis and Rondo) and nine recombinant inbred lines (RILs) resulting from a cross of the parents (FR) under continuously flooded conditions. The parents display diverging methane emissions patterns (i.e. Francis is a low CH4 emitter and Rondo is a high CH4 emitter) as well as diverging agronomic traits (e.g. Francis is low biomass and Rondo is high biomass). The goal of this study was twofold; 1) determine genotypic impact on methane emissions and methane-cycling microbial community; 2) determine if biomass trait differences arising from genotypic differences influence the plant-beneficial microbial community structure.

Funding

Agricultural Research Service, PJ012431

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-09-15

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA663614

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