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Rhizosphere microbial diversity of red fescue and grapevine with varying root biomass in sample

Name: Rhizosphere microbial diversity of red fescue and grapevine with varying root biomass in sample
Published: 2024-06-11T06:20:28+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 06:20 authored by The Pennsylvania State University

Few studies examine rhizosphere bacteria from small amounts (low biomass) of root material. We varied the quantity of grass (Festuca rubra) and grapevine (Vitis spp. rootstock 101-14 Mgt.) absorptive roots (1st branching order), used a sonic water bath to remove rhizosphere soil, extracted DNA from the solution and performed high-throughput sequencing of the 16S rRNA gene region.

Funding

U.S. Department of Agriculture, 2018-67013-27399

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2020-03-28

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA615973

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA615973 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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