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Reference genome of stinkwort, Dittrichia graveolens (L.) Greuter

dataset
posted on 2024-11-23, 22:22 authored by University of California, Santa Cruz
Dittrichia graveolens (L.) Greuter, or stinkwort, is a weedy annual plant within the family Asteraceae. The species is recognized for the rapid expansion of both its native and exotic ranges: in Europe, it has recently expanded its native distribution northward from the Mediterranean basin by nearly 7 degrees latitude, while in California and Australia the plant is an invasive weed of concern. Here, we present the first de novo Dittrichia graveolens genome assembly based on Pacific Biosciences HiFi reads, and anchored into pseudomolecule-scale scaffolds using Dovetail Omni-C sequencing, along with complete chloroplast and mitochondrial genomes.

Funding

NIH: S10 OD018174

USDA: 2020-67013-31856

NERC: NE/W006553/1

SNSF: P2EZP3_178481

NIH: 1S10OD010786-01

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2023-01-06

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA919063

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA919063 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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