Rathayibacter toxicus, Rathayibacter iranicus, Rathayibacter tritici, Rathayibacter rathayi, Clavibacter michiganensis, Pseudoclavibacter Genome sequencing and assembly

dataset

posted on 2024-11-23, 21:52 authored by Oregon State University

A population study of Rathayibacter toxicus from Australia, as well as a paired population of a related novel Rathayibacter species primarily found in Oregon. Several other Rathayibacter species were examined as well. The work reveals the ecological role of CRISPR in Rathayibacter toxicus and uses the novel Rathayibacter species as a comparison where a CRISPR-phage interaction is not involved in the evolution of the bacteria.

Funding

USDA-APHIS: 3.0532.01

USDA-APHIS: 3.0532.02

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-01-30

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA432233

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA432233 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

genome sequencing and assembly raw sequence reads

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