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Rainbow trout RNA-seq from Swanson clonal line (13 tissues) and two tissues from pooled samples

dataset
posted on 2024-06-11, 05:43 authored by USDA/ARS
In this study, non-normalized cDNA libraries were sequenced from 13 different tissues of fish from the Swanson YY male doubled haploid rainbow trout and two different tissues of pooled rainbow trout from a domesticated aquaculture strain (NCCCWA). This study provides comprehensive de novo transcriptome information that is suitable for functional and comparative genomics studies in rainbow trout, including annotation of the genome.

Funding

Agricultural Research Service, 1930-31000-009

National Institute of Food and Agriculture, 2014-67015-21602

Agricultural Research Service, 58-1930-0-059

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2017-06-07

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA389609

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA389609 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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    Categories

    Keywords

    raw sequence reads

    Licence

    Copyright Undetermined

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