Rainbow trout RNA-seq from Swanson clonal line (13 tissues) and two tissues from pooled samples

Name: Rainbow trout RNA-seq from Swanson clonal line (13 tissues) and two tissues from pooled samples
Published: 2024-11-23T21:50:32+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-11-23, 21:50 authored by USDA/ARS

In this study, non-normalized cDNA libraries were sequenced from 13 different tissues of fish from the Swanson YY male doubled haploid rainbow trout and two different tissues of pooled rainbow trout from a domesticated aquaculture strain (NCCCWA). This study provides comprehensive de novo transcriptome information that is suitable for functional and comparative genomics studies in rainbow trout, including annotation of the genome.

Funding

USDA-ARS: 58-1930-0-059

USDA-NIFA: 2014-67015-21602

USDA-ARS: 1930-31000-009

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2017-06-07

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA389609

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA389609 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

Keywords

raw sequence reads

Licence

Exports

RefWorks

BibTeX

Ref. manager

Endnote

DataCite

NLM