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RNA-seq analysis of Pseudomonas fluorescens WH6 deletion mutants of putative regulators of 4-formylaminooxyvinylglycine (FVG) production.

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posted on 2024-06-11, 06:37 authored by USDA
Pseudomonas fluorescens WH6 was the first bacterial strain documented to produce the secondary metabolite 4-formylaminooxyvinylglycine (FVG). The gvg operon is required for production of FVG. A previous study identified mutations in the WH6 genome that lead to a decrease in transcription of genes in the gvg operon. In this study, we compared the transcriptome of putative regulatory mutants to wild type WH6 in an effort to better understand the regulation of FVG production.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-02-18

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA702810

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA702810 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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    Keywords

    raw sequence reads

    Licence

    Copyright Undetermined

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