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Pyrenophora tritici-repentis isolate:AR CrossB10 Genome sequencing and assembly

dataset
posted on 2024-01-27, 00:10 authored by North Dakota State University
Project was designed to further characterize pathogen virulence mechanisms in the wheat- P. tritici-repentis system using a genetic approach. So we focused on developing resources and tools to clone gene (s) involved in Ptr ToxC production. AR CrossB10 was known to produce Ptr ToxC. Therefore, we developed a bi-parental fungal population by crossing P. tritici-repentis isolates AR CrossB10 (Unknown race, Ptr ToxC producer) and 86-124 (race 2, Ptr ToxC non-producer). We genotyped the population and developed a genetic map in parallel to the development of the genome assembly of AR CrossB10. Eventually both of these resources will be used to identify candidate regions for Ptr ToxC production.

Funding

National Institute of Food and Agriculture, 2016-67014-24806

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-05-24

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA678696

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