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Pseudotsuga menziesii reference transcriptome and SNP variation

dataset
posted on 2024-01-26, 22:40 authored by Oregon State University, Conifer Translational Genomics Network
The goals of this study were to (1) develop and evaluate a transcriptome reference for Douglas-fir (Pseudotsuga menziesii) and (2) identify potential single nucleotide polymorphisms (SNPs) in the coastal and interior varieties. Douglas-fir is one of the most economically and ecologically important tree species in the world, and has one of the largest tree breeding programs. Ultimately, these genomic resources are expected to be used for enhancing Douglas-fir breeding, understanding landscape patterns of genetic variation, and helping to understand potential responses to climate change.

Funding

Cooperative State Research, Education, and Extension Service, 2007-55300-18603

U.S. Forest Service, 2007-55300-18603

National Institute of Food and Agriculture, 2009-85606-05680

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2012-05-07

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA163535

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