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Pseudomonas syringae pv. tomato strain:NYS-T1 Genome sequencing and assembly

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posted on 2024-09-29, 05:19 authored by Cornell University

A severe outbreak of bacterial speck of tomato, caused by Pseudomonas syringae pv. tomato occurred in central New York in 2009. An isolate collected from this outbreak, NYS-T1, was found to be highly virulent on tomato. To better understand the relationship of NYS-T1 to other P. syringae strains, and develop a diagnostic assay for aggressive strains of this pathogen, the NYS-T1 genome was sequenced.

Funding

NIFA: 2009-55605-05184

NSF: NSF-PGRP IOS-1025642

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2014-10-09

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

Public Access Level

Public

Accession Number

PRJNA263089

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA263089 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Pseudomonas syringae pv. tomato NYS-T1 eBacteria genome sequencing

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