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Protein predictions for Calonectria pseudonaviculata CBS 139707 (aka cpsCT01)

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posted on 2024-02-15, 22:34 authored by Douglas LusterDouglas Luster
<p>Boxwood blight disease, caused by the fungi Calonectria henricotiae and C. pseudonaviculata, is an emergent threat to natural and managed landscapes worldwide. This dataset contains protein predictions and identifications generated from Calonectria pseudonaviculata CBS 139707 (aka cpsCT01) genome dataset <a href="https://doi.org/10.15482/USDA.ADC/1410184">https://doi.org/10.15482/USDA.ADC/1410184</a>. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Protein predictions and identifications generated from Calonectria pseudonaviculata CBS 139707 (aka cpsCT01) genome dataset .</p> <p>File Name: Calonectria pseudonaviculata protein.fasta.txt</p><p>Resource Description: This dataset contains protein predictions and identifications generated from Calonectria pseudonaviculata CBS 139707 (aka cpsCT01) genome dataset <a href="https://doi.org/10.15482/USDA.ADC/1410184">https://doi.org/10.15482/USDA.ADC/1410184</a></p></li></ul><p></p>

Funding

USDA-ARS: 0500-00059-001-00D

USDA-ARS: 8044-22000-046-00D

USDA-APHIS: USDA-APHIS Farm Bill Program 10007

USDA-ARS: 8042-22000-279

History

Related Materials

  1. 1.
    URL - Cites Genome datasets for Calonectria henricotiae and C. pseudonaviculata causing boxwood blight disease and related fungal species
  2. 2.
    DOI - Is supplemented by Malapi-Wight, M., Veltri, D., Gehesquière, B., Heungens, K., Rivera, Y., Salgado-Salazar, C., & Crouch, J. A. (2019). Global distribution of mating types shows limited opportunities for mating across populations of fungi causing boxwood blight disease. Fungal Genetics and Biology, 131, 103246. https://doi.org/10.1016/j.fgb.2019.103246
  3. 3.
    DOI - Is supplemented by Yang, X., McMahon, M. B., Ramachandran, S. R., Garrett, W. M., LeBlanc, N., Crouch, J. A., Shishkoff, N., & Luster, D. G. (2021). Comparative analysis of extracellular proteomes reveals putative effectors of the boxwood blight pathogens, Calonectria henricotiae and C. pseudonaviculata. Bioscience Reports, 41(3). https://doi.org/10.1042/bsr20203544
  4. 4.
    URL - Is compiled by CodingQuarray v. 2.0
  5. 5.
    URL - Is compiled by Blast2GO v. 5.1

Data contact name

Luster, Douglas

Data contact email

doug.luster@usda.gov

Publisher

Ag Data Commons

Intended use

Molecular biologists and plant pathologists will use this data to identify potential factors involved in virulence mechanisms, fungicide targets and to investigate the biology of the organism.

Temporal Extent Start Date

2019-03-01

Temporal Extent End Date

2019-05-01

Theme

  • Not specified

Geographic Coverage

ISO Topic Category

  • biota
  • environment

National Agricultural Library Thesaurus terms

Buxus sempervirens; blight; fungi; Calonectria; landscapes; data collection; prediction; genome; plant pathogens

OMB Bureau Code

  • 005:18 - Agricultural Research Service

OMB Program Code

  • 005:040 - National Research

ARS National Program Number

  • 303

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Luster, Douglas G. (2020). Protein predictions for Calonectria pseudonaviculata CBS 139707 (aka cpsCT01). Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1519423

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    Categories

    Keywords

    boxwood blightCalonectria pseudonaviculataplant pathogensfungusNP303data.govARS

    Licence

    U.S. Public Domain

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