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Porcine T cell receptor repertoire

dataset
posted on 2024-09-29, 05:50 authored by University of Florida
Pigs are the only common livestock species known to express CD1d-restricted invariant natural killer T (iNKT) cells. We exploited that porcine iNKT cells can be detected using a mouse CD1d-tetramer reagent loaded with the prototypic iNKT cell ligand, α-galactosylceramide to characterize the T cell receptor (TCR) usage of iNKT cells compared to conventional αβ T cells (Tconv). Using a TCR sequencing approach that does not require prior knowledge of any V sequences, we characterized the pig iNKT cell and Tconv TCR repertoire.

Funding

NICHD NIH HHS: R01 HD092286

USDA-NIFA: 2016-09448

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-08-03

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA484384

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA484384 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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