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Porcine Hippocampus RNA-Sequencing

dataset
posted on 2024-11-23, 22:14 authored by USDA-ARS-USMARC
Prebreeding anestrus is a major reason for reproductive failure in gilts. The two types of prebreeding anestrus are delay in attaining puberty (prepubertal, PP) and silent estrus (behavioral anestrus, BA). Differential gene expression in the hippocampus was analyzed in three comparisons; 1) PP cases and cyclic controls at follicular phase of estrous cycle, 2) BA cases and cyclic controls at luteal phase of estrous cycle, and 3) gilts at different stages of the ovarian cycle (cyclic gilts at follicular phase and luteal phase of estrous cycle) to understand gene expression profiles associated with different pubertal phenotypes and how the steroid hormone milieu in different stages of the estrous cycle affects gene expression in this key brain region.

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-09-15

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA763357

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA763357 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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