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Phytophthora infestans Raw sequence reads

dataset
posted on 2024-01-26, 22:59 authored by Cornell University
Genotyping-by-sequencing was performed on 257 Phytophthora infestans isolates representing four United States clonal lineages (US-8, US-11, US-23, and US-24) to investigate diversity within lineages. Data are restriction-site-associated short reads which were aligned to the reference genome in order to identify single nucleotide polymorphisms which were used to study population diversity.

Funding

National Institute of Food and Agriculture, 2011-68004-30154

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2016-05-31

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA323952

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