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Petunia integrifolia Transcriptome or Gene expression

dataset
posted on 2024-11-23, 21:40 authored by Michigan State University
Petunia hybrida (petunia) is one of the most economically important annual bedding plants in the United States. Genomic resources for petunia are lacking. Utilizing RNA-seq, de novo transcriptome assemblies were generated for the progenitor species of cultivated petunia, Petunia axillaris and P. integrifolia, and for P. exserta, a rare species that has been utilized in petunia breeding and as a model to understand pollination syndrome. Transcripts were derived from five tissue types: seedlings, callus, mixed floral developmental stages, shoot apices and trichomes. The transcriptome assemblies are being utilized for molecular marker development and gene discovery for traits of interest in Petunia.

Funding

USDA: 2011-51181-30666

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2014-09-26

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

transcriptome; gene expression

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA262254

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA262254 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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