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Pepper Pseudomonas syringae pathovar syringae (Pss) comparative genomics

Name: Pepper Pseudomonas syringae pathovar syringae (Pss) comparative genomics
Published: 2024-06-11T07:25:25+00:00
License: https://rightsstatements.org/vocab/UND/1.0/
Keywords: raw sequence reads

dataset

posted on 2024-06-11, 07:25 authored by Ohio State University

Pseudomonas syringae pv. syringae (Pss) is an emerging phytopathogen that causes Pseudomonas leaf spot (PLS) disease in pepper plants. Pss can cause serious economic damage to pepper production, yet very little is known about the virulence factors associated with disease in pepper seedlings. We investigated differences in virulence of Pss isolates through whole genome sequence analysis (functional genomics and non-synonymous single nucleotide variations).

Funding

U.S. Department of Agriculture, 2019-51181-3001

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2023-11-05

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA1035930

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1035930 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads

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