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Pachypsylla venusta genome annotations v0.5.3

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posted on 2024-02-13, 12:52 authored by Daniel B. Sloan, Daniel S.T. Hughes, Stephen Richards

This dataset presents the Pachypsylla venusta gene set BCM_v_0.5.3. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Pachypsylla venusta genome assembly 1.0. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use.


Resources in this dataset:

  • Resource Title: Pachypsylla venusta genome annotations v0.5.3.

    File Name: pacven_BCM_version_0.5.3.tar.gz

    Resource Description: The attached tar.gz archive (PVEN_BCM_version_0.5.3.tar.gz) contains the following files:

    PVEN.CDS.fna. CDS sequences of Pachypsylla venusta genome annotations v0.5.3.

    PVEN.faa. Amino acid sequences of Pachypsylla venusta genome annotations v0.5.3.

    PVEN.fna. cDNA sequences of Pachypsylla venusta genome annotations v0.5.3.

    PVEN.Models.gff3. Gff3 of all gene predictions of Pachypsylla venusta genome annotations v0.5.3.

    PVEN.Analysis.gff3 Gff3 of all evidence contributing to Pachypsylla venusta genome annotations v0.5.3.

Funding

National Human Genome Research Institute: U54 HG003273

History

Data contact name

Sloan, Daniel

Data contact email

dbsloan@rams.colostate.edu

Publisher

Ag Data Commons

Theme

  • Not specified

ISO Topic Category

  • biota

Ag Data Commons Group

  • Insects - i5K

National Agricultural Library Thesaurus terms

genomics; genome assembly; genes; Pachypsylla venusta

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Sloan, Daniel B.; Hughes, Daniel S.T.; Richards, Stephen (2018). Pachypsylla venusta genome annotations v0.5.3. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1438576

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