Natural Experiments of SARS-CoV-2 Transmission in captive cervid agro-ecosystems

dataset

posted on 2024-11-23, 21:31 authored by Texas A&M University

Using the large deer farm network in Texas, we aim to quantify the frequency of captive cervid infection by SARS-CoV-2 and determine the the degree of horizontal transmission among captive deer and sympatric livestock and wildlife. For this, we will analyze viral genomes from deer and other species to infer the directionality of transmission of SARS-CoV-2. This project will provide critical information for management decisions to improving agricultural biosecurity and protect animal health.

Funding

USDA-APHIS: 2023-70432-39559

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2024-08-16

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

Public Access Level

Public

Accession Number

PRJNA1149050

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It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA1149050 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

raw sequence reads eRawSequenceReads

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