- No file added yet -

Monilinia fructigena strain:Mfg5-SP-A Genome sequencing and assembly

dataset

posted on 2024-06-11, 07:12 authored by Contact Kurt Zeller, USDA-APHIS-PPQ-S&T

The Whole Genome Sequences (WGS) of Monilinia fructigena Mfg5-SP-A considered to be exotic pathogen category was sequenced using PacBio and the Illumina platforms. The Pac Bio reads were assembled into contigs using Canu assembler and polished to improve the quality of bases with both technology (Illumina and PacBio) with read data with PILON (hybrid correction/polish) and developed the scaffold using Pacbio and Illumina assembly.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2018-10-21

Theme

Non-geospatial

ISO Topic Category

biota

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome

Pending citation

Public Access Level

Public

Accession Number

PRJNA463086

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA463086 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

Keywords

Monilinia fructigena Mfg5-SP-A eEukaryotes genome sequencing

Licence

Exports

RefWorks

BibTeX

Ref. manager

Endnote

DataCite

NLM