Ag Data Commons
Browse

Modulation of gene expression in cow blood

dataset
posted on 2024-11-23, 22:10 authored by NC A&T State University, Mulumebet Worku, Hamid Ismail
Blood samples were collected from three cows from the NC Agricultural and Technical State University farm. The blood samples were treated with G0 (control), G1, G3, G4, and G9. The RNA was then extracted and sequenced using RNA-Seq. The sequence reads of FASTQ files were aligned to the cow whole reference genome and transcriptome. The archived SRA data will include paired end FASTQ files, BAM for whole genome alignment, and BAM for whole transcriptome alignment.

Funding

USDA: 1016490

History

Data contact name

BioProject Curation Staff

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2021-04-16

Theme

  • Non-geospatial

ISO Topic Category

  • biota

National Agricultural Library Thesaurus terms

sequence analysis

Pending citation

  • No

Public Access Level

  • Public

Accession Number

PRJNA722483

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA722483 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

Usage metrics

    Categories

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC