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Minimum Inhibitory Concentration (MIC) data for third generation cephalosporin resistant E. coli and extended spectrum beta-lactamase producing Enterobacteriaceae from feedlot cattle

dataset
posted on 2024-02-15, 19:55 authored by Getahun AggaGetahun Agga

The data presents the antimicrobial susceptibility testing results in three separate files: 1) third generation cephalosporin resistant E. coli isolates obtained on cefotaxime supplemented media; 2) extended spectrum beta-lactamase (ESBL) producing E. coli, and 3) ESBL-producing Klebsiella, Enterobacter and Citrobacter species obtained on chromogenic media. The data was generated as part of a research project that evaluated the impact of tylosin supplementation of feedlot cattle on the dynamics of antimicrobial resistant fecal bacteria. The study was a longitudinal design with periodic sampling of fecal samples from individual animals over the entire feeding period. Two publications from the project, one describing the study design in detail, and the other specifically reporting on these data, are linked to the database.

Resources in this dataset:

  • Resource Title: Third generation cephalosporin resistant E. coli File Name: TYAMR-TGC Combined Data.xlsx Resource Description: Third generation cephalosporin resistant E. coli from TyAMR project.

  • Resource Title: ESBL-producing E. coli File Name: TyAMR-ESBLs isolates-combined AST data.xlsx Resource Description:

  • Resource Title: ESBL-producing Klebsiella, Enterobacter and Citrobacter spp. File Name: TyAMR KEC-with AST interpretation.xlsx Resource Description: ESBL-producing Klebsiella, Enterobacter and Citrobacter obtained as part of TyAMR project.

Funding

USDA-ARS: 5040-12630-007-000-D

History

Data contact name

Agga, Getahun

Data contact email

Getahun.Agga@usda.gov

Publisher

Ag Data Commons

Temporal Extent Start Date

2017-04-25

Temporal Extent End Date

2018-04-30

Theme

  • Not specified

Geographic Coverage

{"type":"FeatureCollection","features":[{"geometry":{"type":"Point","coordinates":[-86.4490803,36.9811397]},"type":"Feature","properties":{}}]}

Geographic location - description

Bowling Green, Kentucky

ISO Topic Category

  • farming
  • health

National Agricultural Library Thesaurus terms

minimum inhibitory concentration; antibiotic resistance; Escherichia coli; beta-lactamase; feedlots; cefotaxime; beta-lactamase bacteria; Klebsiella; Enterobacter; Citrobacter; research projects; tylosin; fecal bacteria; feces; experimental design; databases; beef cattle; food safety

OMB Bureau Code

  • 005:18 - Agricultural Research Service

OMB Program Code

  • 005:040 - National Research

ARS National Program Number

  • 108

Pending citation

  • No

Public Access Level

  • Public

Preferred dataset citation

Agga, Getahun E. (2023). Minimum Inhibitory Concentration (MIC) data for third generation cephalosporin resistant E. coli and extended spectrum beta-lactamase producing Enterobacteriaceae from feedlot cattle. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1529171